Man pages for ginnyintifa/PTMscape
| calculate_tbt_negative_ptms | Analyse negative cross talk events in domains. |
| calculate_tbt_positive_ptms | Analyse positive cross talk events in domains. |
| generate_feature_t | Generate feature data for targeted proteome. |
| generate_feature_wp | Generate feature data for whole proteome |
| generate_training_test_data_t | Generate training and prediction datasets for targeted... |
| generate_training_test_data_wp | Generate training and prediction datasets for whole proteome |
| predict_on_targeted_proteome | Predict on targeted proteome. |
| predict_on_whole_proteome | A function to predict and annotate whole proteom PTM sites |
| predict_with_liblinear | Process prediction with Liblinear |
| present_prediction_t | Present Liblinear prediction results |
| present_prediction_wp | Present Liblinear prediction results |
| process_n_fold_cross_validation | Process n_fold cv |
| PTM_domain_mapping_enrichment | Building up domain analysis. |
