generate_feature_wp: Generate feature data for whole proteome
In ginnyintifa/PTMscape:

Description Usage Arguments Details Examples

This function generates feature data for whole proteome by mapping the positive PTM info to protein sequences, constructing windows and extracting 3 sets of features.

1 2	generate_feature_wp(ptm_site, flanking_size = 12, SPIDER = T, positive_info_file, protein_fasta_file, output_label)

`ptm_site`	The amino acid this PTM involves, in upper-case single letter representation.
`flanking_size`	The number of residues surrounding each side of the center residue, the total window size will be 2*flanking_size+1, default to 12.
`SPIDER`	A boolean variable indicating the usage of SPIDER3 features, default set to TRUE.
`positive_info_file`	A text file containing the positive PTM sites info in required format.
`protein_fasta_file`	A text file containing the proteins sequences of interest in Fasta format.
`output_label`	The string to tag the output files.

This function outputs the features generated from input files.

generate_feature_wp(ptm_site = "S",
             flanking_size = 12,
             SPIDER = T,
             positive_info_file = "ps_PSP.tsv",
             protein_fasta_file = "S_sp_fasta.tsv",
             output_label = "ps_0103")