ppccajack: Fitting PPCCA model with jackknifing

In gnyamundanda/exploBATCH: Explore batch effect (exploBATCH) is a package for discovering and correcting for batch effect using an approach in Nyamundanda et al (2017).

Description

Fitting PPCCA model with jackknifing

Usage

ppccajack(Y, res2, n.cores)

Arguments

Y	Expresion data
res2	Results of PPCCA
n.cores	Number of corres

Details

Fitting PPCCA model with jackknifing

Author(s)

Nyamundanda, G., Poudel, P., Patil, Y. and Sadanandam, A.

References

Nyamundanda, G., Poudel, P., Patil, Y. and Sadanandam, A., 2017. A novel and robust statistical method to diagnose and correct batch effects in genomic data.

Examples

##---- Should be DIRECTLY executable !! ----
##-- ==>  Define data, use random,
##--	or do  help(data=index)  for the standard data sets.

gnyamundanda/exploBATCH documentation built on May 20, 2019, 3:31 p.m.