df.clean<-function(df=NULL, type="correlation", threshold=NULL, smaller=TRUE, index=NULL){
rm<-c()
if(is.null(index)){
index=1:dim(df)[2]
}else{
index=index
}
if(type=="mean"){
if(smaller){
for(i in index){
if(mean(as.numeric(df[,i]))<=threshold){
rm<-c(rm, i)
}else{
next
}
}
}else{
for(i in index){
if(mean(as.numeric(df[,i]))>=threshold){
rm<-c(rm, i)
}else{
next
}
}
}
if(length(rm)!=0){
df.new=subset(df, select=-rm)
}else{
df.new=df
}
return(df.new)
}else if(type=="correlation"){
df.new<-df[, index]
tmp <- cor(df.new)
tmp[upper.tri(tmp)] <- 0
diag(tmp) <- 0
df.new <- df.new[,!apply(tmp,2,function(x) any(x>=threshold))]
df.new <-cbind(df[,-index], df.new)
return(df.new)
}else{
stop("Type not supported.")
}
}
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