Files in grantbrown/ABSEIR

Posterior Approximation to Fully Bayesian Spatial SEIR Models Using Multithreaded C++

.travis.yml

DESCRIPTION

NAMESPACE

R/ComputeR0.R R/RSim.R R/RcppExports.R R/SEIRModel.R R/dataModel.R R/datasets.R R/distanceModel.R R/epidemicSimulations.R R/exposureModel.R R/initialValueContainer.R R/modelCompare.R R/plot_SpatialSEIRModel.R R/print_summary_SpatialSEIRModel.R R/reinfectionModel.R R/samplingControl.R R/summary_SpatialSEIRModel.R R/tDistanceModel.R R/transitionPriors.R R/update_SpatialSEIRModel.R R/utility.R R/zzz.R README.md

data/Kikwit1995.rda

data/WestAfrica2015.rda

man/ComputeR0.Rd man/DataModel.Rd man/DistanceModel.Rd man/ExponentialTransitionPriors.Rd man/ExposureModel.Rd man/InitialValueContainer.Rd man/Kikwit1995.Rd man/PathSpecificTransitionPriors.Rd man/ReinfectionModel.Rd man/Rsim.Rd man/SamplingControl.Rd man/SpatialSEIRModel.Rd man/TDistanceModel.Rd man/TransitionPriors.Rd man/WeibullTransitionPriors.Rd man/WestAfrica2015.Rd man/compareModels.Rd man/epidemic.simulations.Rd man/plot.SpatialSEIRModel.Rd man/print.summary.SpatialSEIRModel.Rd man/summary.SpatialSEIRModel.Rd man/update.SpatialSEIRModel.Rd

src/Makevars

src/RcppExports.cpp

src/SEIRSimNodes.cpp

src/dataModel.cpp

src/distanceModel.cpp

src/exposureModel.cpp

src/include/ABSEIR_constants.hpp

src/include/SEIRSimNodes.hpp

src/include/dataModel.hpp

src/include/distanceModel.hpp

src/include/exposureModel.hpp

src/include/initialValueContainer.hpp

src/include/modelComponent.hpp

src/include/reinfectionModel.hpp

src/include/samplingControl.hpp

src/include/spatialSEIRModel.hpp

src/include/transitionDistribution.hpp

src/include/transitionPriors.hpp

src/include/util.hpp

src/initialValueContainer.cpp

src/reinfectionModel.cpp

src/samplingControl.cpp

src/spatialSEIRModel.cpp

src/spatialSEIRModel_basic.cpp

src/spatialSEIRModel_beaumont.cpp

src/spatialSEIRModel_delmoral.cpp

src/spatialSEIRModel_simulate.cpp

src/transitionPriors.cpp

src/util.cpp

src/weibullTransitionDistribution.cpp

tests/testthat.R tests/testthat/testDistanceModels.R tests/testthat/testEpsilonCalc.R tests/testthat/testMeanStructure.R tests/testthat/testPSSEIR.R tests/testthat/testReinfection.R tests/testthat/testSLSEIR.R tests/testthat/testTDistanceModels.R vignettes/Introduction.Rmd vignettes/Kikwit.Rmd vignettes/Measles.Rmd vignettes/WestAfrica.Rmd

grantbrown/ABSEIR documentation built on Oct. 14, 2021, 2:32 p.m.