useDataset: Select a dataset to use and updates Mart object

In grimbough/biomaRt: Interface to BioMart databases (i.e. Ensembl)

Select a dataset to use and updates Mart object

Description

This function selects a dataset and updates the Mart object

Usage

useDataset(dataset,mart, verbose = FALSE)

Arguments

dataset	Dataset you want to use. List of possible datasets can be retrieved using the function listDatasets
mart	Mart object created with the useMart function
verbose	Give detailed output of what the method is doing, for debugging

Author(s)

Steffen Durinck

Examples

if(interactive()){
mart=useMart("ensembl")
mart=useDataset("hsapiens_gene_ensembl", mart = mart)
}

grimbough/biomaRt documentation built on Aug. 7, 2024, 8:56 p.m.