Man pages for grisslab/scAnnotatR
Pretrained learning models for cell type prediction on single cell RNA-sequencing data

caret_modelcaret_model
cell_typecell_type
cell_type-setSetter for cell_type. Change cell type of a classifier
classify_cellsClassify cells from multiple models
delete_modelDelete model/branch from package
internalInternal functions of scAnnotatR package
load_modelsLoad classifiers from databases
marker_genesmarker_genes
parentparent
plant_treePlant tree from list of models
plot_roc_curvePlot roc curve
p_thresp_thres
p_thres-setSetter for predicting probability threshold
save_new_modelSave a model to the package
scAnnotatRscAnnotatR class.
showShow object
test_classifierTesting process.
tirosh_mel80_exampleA Seurat Object Sample
train_classifierTrain cell type classifier
grisslab/scAnnotatR documentation built on March 20, 2023, 2:42 a.m.