cell_type-set: Setter for cell_type Change cell type for a classifier

In grisslab/scClassifR: Pretrained learning models for cell type prediction on single cell RNA-sequencing data

Description

Setter for cell_type Change cell type for a classifier

Usage

cell_type(classifier) <- value

Arguments

classifier	scClassifR object. The object is returned from the train_classifier function.
value	the new cell type

Value

scClassifR object with the new cell type.

Examples

data("tirosh_mel80_example")
selected_features_B = c("CD19", "MS4A1", "CD79A")
set.seed(123)
clf_b <- train_classifier(train_obj = tirosh_mel80_example, 
features = selected_features_B, cell_type = "B cells")
cell_type(clf_b) <- "B cell"

grisslab/scClassifR documentation built on Oct. 27, 2021, 12:13 p.m.