getContigSeq: Retrieve the sequence of a contig
In gschofl/biofiles: An Interface for GenBank/GenPept Flat Files
Description
Usage
Arguments
Details
Value
View source: R/misc-functions.R
Description
## EXPERIMENTAL ##
Usage
1
getContigSeq(x, merge = TRUE)
Arguments
x
A gbRecord object.
merge
Merge the retrieved contig sequences.
Details
For GenBank records that contain a CONTIG field, try to get the contig
sequences and (optionally) merge them into a single sequence.
Value
A DNAStringSet instance.
gschofl/biofiles documentation built on Sept. 27, 2020, 12:08 a.m.
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Description Usage Arguments Details Value
View source: R/misc-functions.R
Description
## EXPERIMENTAL ##
Usage
1 | getContigSeq(x, merge = TRUE)
|
Arguments
x |
A |
merge |
Merge the retrieved contig sequences. |
Details
For GenBank records that contain a CONTIG field, try to get the contig sequences and (optionally) merge them into a single sequence.
Value
A DNAStringSet instance.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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