Description Usage Arguments Value Author(s)
This functions plots the fit of a given region and optionally the read counts from the GenoGAMDataSet object
1 2 3 |
x |
A |
ggd |
A |
ranges |
A |
seqnames |
A chromosome name. Together with start and end it is an alternative way ob selecting a region |
start |
The start of a region |
end |
The end of a region |
scale |
Logical, should all tracks be scaled to the same y-axis? |
cap |
If FALSE deactivates the cap that prevents to accidentaly plot a too larger area. The default cap is 1Mbp. |
log |
Should log values be plotted on the y-axis |
... |
Additional parameters that will be passed to the basic plot routine |
A plot of all tracks either using the ggplot2 or the base R framework
Georg Stricker georg.stricker@in.tum.de
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