API for gtonkinhill/fastbaps
A fast genetic clustering algorithm that approximates a Dirichlet Process Mixture model
| Global functions | |
|---|---|
| as.phylo.hclust.node.attributes | Man page Source code |
| best_baps_partition | Man page Source code |
| bhier | Source code |
| bhier_parallel | Source code |
| boot_fast_baps | Man page Source code |
| calc_ddk | Source code |
| calc_marginal_llk | Man page Source code |
| calc_prior_prob | Source code |
| combine_clusterings | Source code |
| fast_baps | Man page Source code |
| find_max_cluster_subset | Man page Source code |
| fix_clusters | Man page Source code |
| get_hclust | Man page Source code |
| import_fasta_sparse_nt | Man page Source code |
| import_fasta_to_vector_each_nt | Source code |
| iorder | Man page Source code |
| log_add | Source code |
| multi_level_best_baps_partition | Man page Source code |
| multi_res_baps | Man page Source code |
| optimise_prior | Man page Source code |
| part_llks | Source code |
| root_mll | Source code |
| snp_dist | Man page Source code |
| snp_similarity | Man page Source code |
| summarise_clusters | Source code |
| tree_llk | Source code |
