diagPlot: Diagnostic Plots for Graphical Checks of Negative Binomial...
In gu-mi/NBGOF: Goodness-of-Fit Tests and Model Diagnostics for Negative Binomial Regression of RNA Sequencing Data
Description
Usage
Arguments
Value
Author(s)
References
See Also
Description
This function makes diagnostic plots based on the goodness-of-fit test results (an "gofm" object) from
nb.gof.m: a histogram of p-values or a uniform quantile-quantile (Q-Q) plot is available.
Usage
1
Arguments
gofm.obj
an object of class "gofm" from the nb.gof.m output.
type
which diagnostic plot to make. Either qq for a uniform Q-Q plot, or hist for a histogram of p-values.
binwidth
the bin width used when drawing a histogram.
Value
A ggplot object, either a Q-Q plot (type="qq") or a histogram (type="hist").
Author(s)
Gu Mi <mig@stat.oregonstate.edu>, Yanming Di, Daniel Schafer
References
See https://github.com/gu-mi/NBGOF/wiki/ for more details.
See Also
nb.gof.m for simulated data examples.
gu-mi/NBGOF documentation built on Oct. 25, 2020, 3:30 a.m.
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Description Usage Arguments Value Author(s) References See Also
Description
This function makes diagnostic plots based on the goodness-of-fit test results (an "gofm" object) from
nb.gof.m: a histogram of p-values or a uniform quantile-quantile (Q-Q) plot is available.
Usage
1 |
Arguments
gofm.obj |
an object of class "gofm" from the |
type |
which diagnostic plot to make. Either |
binwidth |
the bin width used when drawing a histogram. |
Value
A ggplot object, either a Q-Q plot (type="qq") or a histogram (type="hist").
Author(s)
Gu Mi <mig@stat.oregonstate.edu>, Yanming Di, Daniel Schafer
References
See https://github.com/gu-mi/NBGOF/wiki/ for more details.
See Also
nb.gof.m for simulated data examples.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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