summary.gofm: Report Summaries of the GOF Test Results for NB Dispersion...
In gu-mi/NBGOF: Goodness-of-Fit Tests and Model Diagnostics for Negative Binomial Regression of RNA Sequencing Data
Description
Usage
Arguments
Details
Value
Author(s)
References
See Also
Description
A summary method of GOF test results based on a "gofm"
object obtained from the nb.gof.m outputs
Usage
1
Arguments
x
an object of class "gofm" from the nb.gof.m output
conf.env
confidence level for the envelope
data.note
a note on how data are simulated or the source of data
...
(for future use)
Details
This is a generic function for summarizing goodness-of-fit test results of testing
negative binomial dispersion models.
Value
Information of the dataset, simulation parameter specifications, exact binomial test
results, and Monte Carlo GOF p-values.
Author(s)
Gu Mi <neo.migu@gmail.com>, Yanming Di, Daniel Schafer
References
See https://github.com/gu-mi/NBGOF/wiki/ for more details.
See Also
nb.gof.m for simulated data examples, and arab for
a real RNA-Seq data example.
gu-mi/NBGOF documentation built on Oct. 25, 2020, 3:30 a.m.
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Description Usage Arguments Details Value Author(s) References See Also
Description
A summary method of GOF test results based on a "gofm"
object obtained from the nb.gof.m outputs
Usage
1 |
Arguments
x |
an object of class "gofm" from the |
conf.env |
confidence level for the envelope |
data.note |
a note on how data are simulated or the source of data |
... |
(for future use) |
Details
This is a generic function for summarizing goodness-of-fit test results of testing negative binomial dispersion models.
Value
Information of the dataset, simulation parameter specifications, exact binomial test results, and Monte Carlo GOF p-values.
Author(s)
Gu Mi <neo.migu@gmail.com>, Yanming Di, Daniel Schafer
References
See https://github.com/gu-mi/NBGOF/wiki/ for more details.
See Also
nb.gof.m for simulated data examples, and arab for
a real RNA-Seq data example.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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