R/caffeine.R

In guido-s/meta: General Package for Meta-Analysis

#' Caffeine for daytime drowsiness
#' 
#' @description
#' Caffeine for daytime drowsiness (Cochrane Practice review)
#' 
#' @details
#' Data come from the Cochrane Practice review on caffeine for daytime
#' drowsiness. Eight fictitous studies evaluate the risk of headaches
#' after drinking either caffeinated or decaffeinated coffee.
#' 
#' @name caffeine
#' 
#' @docType data
#' 
#' @format A data frame with the following columns:
#' \tabular{rl}{
#' \bold{\emph{study}}\tab study label \cr
#' \bold{\emph{year}}\tab year of publication \cr
#' \bold{\emph{h.caf}}\tab Number of participants with headaches (caffeine group) \cr
#' \bold{\emph{n.caf}}\tab Number of participants (caffeine group) \cr
#' \bold{\emph{h.decaf}}\tab Number of participants with headaches (decaf group) \cr
#' \bold{\emph{n.decaf}}\tab Number of participants (decaf group) \cr
#' \bold{\emph{D1}}\tab Domain 1 of risk of bias 2 tool (RoB 2) \cr
#' \bold{\emph{D2}}\tab Domain 2 (RoB 2) \cr
#' \bold{\emph{D3}}\tab Domain 3 (RoB 2) \cr
#' \bold{\emph{D4}}\tab Domain 4 (RoB 2) \cr
#' \bold{\emph{D5}}\tab Domain 5 (RoB 2) \cr
#' \bold{\emph{rob}}\tab Overall RoB 2 assessment
#' }
#' 
#' @seealso \code{\link{metabin}}, \code{\link{rob}}
#' 
#' @references
#' Higgins JPT, Savović J, Page MJ, Sterne JA on behalf of the RoB2
#' Development Group (2019):
#' Revised Cochrane risk-of-bias tool for randomized trials.
#' \url{https://www.riskofbias.info/welcome/rob-2-0-tool}
#' 
#' 
#' @keywords datasets
#' 
#' @examples
#' oldset <- settings.meta("RevMan5")
#' 
#' data(caffeine)
#' head(caffeine)
#'
#' m1 <- metabin(h.caf, n.caf, h.decaf, n.decaf, sm = "OR",
#'   data = caffeine, studlab = paste(study, year))
#'
#' # Add risk of bias assessment to meta-analysis
#' m1 <- rob(D1, D2, D3, D4, D5, overall = rob, data = m1, tool = "rob2")
#'
#' # Print risk of bias assessment
#' rob(m1)
#' 
#' # Forest plot with risk of bias assessment
#' forest(m1)
#'
#' settings.meta(oldset)


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