makeblastdb: make blast database

Description Usage Arguments Author(s)

View source: R/blast.R

Description

make blast database

Usage

1
2
makeblastdb(db, seqcode = NULL, dbtype = "prot", args = "",
  path = NULL, runblast = TRUE)

Arguments

db

KEGG db or sequences

seqcode

speceis name or KEGG code (without spaces)

dbtype

character "nucl" or "prot"

args

other arguments for makeblastdb

path

working directory

runblast

use blast+ or diamond

Author(s)

Kai Guo


guokai8/seq2Fun documentation built on March 22, 2020, 8:10 p.m.