runblast: run blast analysis

Description Usage Arguments Author(s)

View source: R/blast.R

Description

run blast analysis

Usage

1
2
runblast(seq_in, dbfile, tool = "blastp", evalue = 1e-10,
  num_threads = 1, outfmt = 10, blastr)

Arguments

seq_in

query sequences

dbfile

database

tool

blastx, blastn or blastp

evalue

e-value

num_threads

num_threads

outfmt

blast out format

blastr

blast output result file

Author(s)

Kai Guo


guokai8/seq2Fun documentation built on March 22, 2020, 8:10 p.m.