runblast: run blast analysis
In guokai8/seq2Fun: Annotate sequences with KEGG pathways
Description
Usage
Arguments
Author(s)
Description
run blast analysis
Usage
1
2
runblast(seq_in, dbfile, tool = "blastp", evalue = 1e-10,
num_threads = 1, outfmt = 10, blastr)
Arguments
seq_in
query sequences
dbfile
database
tool
blastx, blastn or blastp
evalue
e-value
num_threads
num_threads
outfmt
blast out format
blastr
blast output result file
Author(s)
Kai Guo
guokai8/seq2Fun documentation built on March 22, 2020, 8:10 p.m.
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Description Usage Arguments Author(s)
Description
run blast analysis
Usage
1 2 | runblast(seq_in, dbfile, tool = "blastp", evalue = 1e-10,
num_threads = 1, outfmt = 10, blastr)
|
Arguments
seq_in |
query sequences |
dbfile |
database |
tool |
blastx, blastn or blastp |
evalue |
e-value |
num_threads |
num_threads |
outfmt |
blast out format |
blastr |
blast output result file |
Author(s)
Kai Guo
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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