validBSgenome: Get/Validate BSgenome
In haibol2016/ArchR_debug: Analyzing single-cell regulatory chromatin in R.
View source: R/ValidationUtils.R
validBSgenome R Documentation
Get/Validate BSgenome
Description
This function will attempt to get or validate an input as a BSgenome.
Usage
validBSgenome(genome = NULL, masked = FALSE)
Arguments
genome
This option must be one of the following: (i) the name of a valid ArchR-supported genome ("hg38", "hg19", or "mm10"),
(ii) the name of a BSgenome package (for ex. "BSgenome.Hsapiens.UCSC.hg19"), or (iii) a BSgenome object.
masked
A boolean describing whether or not to access the masked version of the selected genome. See BSgenome::getBSgenome().
haibol2016/ArchR_debug documentation built on June 15, 2022, 5:42 p.m.
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View source: R/ValidationUtils.R
| validBSgenome | R Documentation |
Get/Validate BSgenome
Description
This function will attempt to get or validate an input as a BSgenome.
Usage
validBSgenome(genome = NULL, masked = FALSE)
Arguments
genome |
This option must be one of the following: (i) the name of a valid ArchR-supported genome ("hg38", "hg19", or "mm10"),
(ii) the name of a |
masked |
A boolean describing whether or not to access the masked version of the selected genome. See |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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