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.gitignore
DESCRIPTION
NAMESPACE
R/edgefinder.R
README.md
data/DUP.RData
data/SIM.RData
data/WT.RData
edgefinder.Rproj
man/DUP.Rd
man/SIM.Rd
man/WT.Rd
man/clusteringCoef.Rd
man/collapsedGraph.Rd
man/edgefinder.Rd
man/graphComponents.Rd
man/plotBitmapCC.Rd
man/plotCluster.Rd
man/plotDegCC.Rd
man/plotMixture.Rd
man/shortSummary.Rd
man/shortestPathDistance.Rd
man/summarizeClusters.Rd
vignettes/DUPbitmap.png
vignettes/DUPclusters.png
vignettes/DUPclustersCropped.png
vignettes/DUPdg.png
vignettes/DUPdgHighlight.png
vignettes/DUPfit.png
vignettes/SIMbitmap.png
vignettes/SIMbitmap2.png
vignettes/SIMbitmap3.png
vignettes/SIMcluster1.png
vignettes/WTbitmap.png
vignettes/WTcluster5.png
vignettes/WTcluster9.png
vignettes/WTclusters.png
vignettes/WTclustersCropped.png
vignettes/WTdg.png
vignettes/WTfit.png
vignettes/edgefinder.R
vignettes/edgefinder.Rmd
vignettes/edgefinder.html
vignettes/edgefinder.md
vignettes/edgefinder.pdf