plotDegCC: Plot the degree of nodes versus the degree times the...
In haimbar/edgefinder: Detect Edges in Sparse Co-expression Graphs
Description
Usage
Arguments
Examples
Description
The x-axis represents the number of neighbors of each node, and the y-axis represents the proportion of neighbors which are connected to each other.
Usage
1
Arguments
edgefinderobj
The object (list) returned by edgefinder.
clusterInfo
obtained from graphComponents. If not provided by the user, it will be computed on the fly.
highlightNodes
A vector of node-numbers which will be shown in red. Default is NULL.
Examples
1
2
3
4
data(WT)
WTres <- edgefinder(WT, ttl = "Wild Type")
WTComp <- graphComponents(WTres$AdjMat)
plotDegCC(WTres,WTComp)
haimbar/edgefinder documentation built on Dec. 20, 2021, 2:45 p.m.
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Description Usage Arguments Examples
Description
The x-axis represents the number of neighbors of each node, and the y-axis represents the proportion of neighbors which are connected to each other.
Usage
1 |
Arguments
edgefinderobj |
The object (list) returned by edgefinder. |
clusterInfo |
obtained from graphComponents. If not provided by the user, it will be computed on the fly. |
highlightNodes |
A vector of node-numbers which will be shown in red. Default is NULL. |
Examples
1 2 3 4 | data(WT)
WTres <- edgefinder(WT, ttl = "Wild Type")
WTComp <- graphComponents(WTres$AdjMat)
plotDegCC(WTres,WTComp)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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