| getSortedMatrix | Function to order the alteration matrix to evidence the... |
| get.weight | Weight function for a binary alteration matrix of genes and... |
| incrementMatrix | Function to increment gene matrix |
| memoSort | Function to sort gene mutation matrix from... |
| me.test.fisher | Function to calculate a mutual exclusion p-value in a gene... |
| me.test.permutateSamples | Function to calculate a mutual exclusion p-value in a gene... |
| oncoprint | function to create an oncoprint plot |
| tcga_brca | Description of the TCGA BRCA. |
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