Man pages for hclimente/scudo
Switch Catcher, Uprooting Differentially-expressed Ones
| calculate_DE | Calculate sample-wise differential expression |
| calculate_dPSI | Calculate deltaPSI |
| compute_ecdf | Get empirical distribution |
| compute_isoform_switches | Compute isoform switches |
| find_switches | Find isoform switches |
| get_gene_expression | Read expression |
| read_tx_expression | Read expression |
| score_delta | Measure p of delta |
| uninformative_input | Pseudo-ecdf when all values are 0 |
| uninformative_output | Pseudo-ecdf when input is insufficient |
