calculate_DE: Calculate sample-wise differential expression
In hclimente/scudo: Switch Catcher, Uprooting Differentially-expressed Ones
Description
Usage
Arguments
Value
Description
Computes the gene expression difference between ctrl and case
conditions of the same sample. If no ctrl sample is available, computes the
difference with the median expression.
Usage
1
calculate_DE(geneExpression)
Arguments
geneExpression
data.frame containing the gene expression in long
format.
Value
A data.frame with the difference in expression DE between
the conditions per gene and sample.
hclimente/scudo documentation built on May 25, 2019, 5:26 p.m.
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Description Usage Arguments Value
Description
Computes the gene expression difference between ctrl and case conditions of the same sample. If no ctrl sample is available, computes the difference with the median expression.
Usage
1 | calculate_DE(geneExpression)
|
Arguments
geneExpression |
data.frame containing the gene expression in long format. |
Value
A data.frame with the difference in expression DE between
the conditions per gene and sample.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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