aracne_network: Re-format ARACNe Network.

Description Usage Arguments Value Author(s) Examples

View source: R/aracne_network.R

Description

Re-format ARACNe network in regulon object to data.frame with regulator, target and direction columns.

Usage

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aracne_network(regulon)

Arguments

regulon

(regulon) ARACNe network.

Value

(data.frame) Network, with "reg", "target" and "direction" in column name. For direction, 1/0 denotes positive/negative regulation.

Author(s)

DING, HONGXU (hd2326@columbia.edu)

Examples

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library(bcellViper)
data(bcellViper)
aracne_network(regulon[1:10])

hd2326/pageRank documentation built on Dec. 18, 2020, 8:44 a.m.