These functions generate tables using information from the fragment assignment module.
fragment.matched.ions generates a matrix containing detailed information about the assigned fragments.
fragment.matched.peaks generates the assigned fragments with matches grouped by matched peak.
fragment.matched.clusters generates a matrix of assignments along with their original m/z and charge state values as seen in the raw spectra.
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output from read.bupid
decides the return type: list or matrix
Returns the assignment information table.
Returns the matrix of assignments.
Returns the list or matrix of assignments.
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