API for heilandd/SPATAwrappers
What the Package Does (One Line, Title Case)
| Global functions | |
|---|---|
| %||% | Man page |
| CellProfiler2Matlab | Man page |
| CellProfilerCellDistance | Man page Source code |
| CellProfilerDistancePlot | Man page |
| CellProfilerImport | Man page Source code |
| CellProfilerImportObjectPositions | Man page Source code |
| CellProfilerPlotDistance | Man page |
| CellProfilerPlotDistanceAddLayer | Man page |
| Create.ref.bins | Man page Source code |
| DownScaleSeurat | Man page Source code |
| MergeInferCNVSeurat | Man page Source code |
| `%||%` | Source code |
| addNucleusPosition | Man page |
| check_color_to | Man page Source code |
| createInternalReferenceDataset | Man page Source code |
| createReferenceDIM | Man page Source code |
| createShell | Man page Source code |
| getAdjacentSpots | Man page Source code |
| getCNVStatistics | Man page |
| getDistance | Man page Source code |
| getMoransI | Man page Source code |
| getNucleusPosition | Man page |
| getSNV | Man page Source code |
| getSNV.spotwise | Man page Source code |
| getSingleCellDeconv | Man page Source code |
| getSpatialAdjacentRegression | Man page Source code |
| getSubColors | Man page |
| getSurroundedSpots | Man page Source code |
| getSurroundedSpots.sc | Man page Source code |
| ggLayerGenSet | Man page |
| hlpr_bins | Man page Source code |
| hlpr_merge.pos | Man page Source code |
| hlpr_normalize_imap | Man page Source code |
| hlpr_smooth_shiny | Man page Source code |
| importSNVmatrix | Man page Source code |
| inferEnhancedPCA | Man page Source code |
| inferJuxtaposition | Man page Source code |
| inferSpatial.ac | Man page Source code |
| inferSpatial.mc | Man page Source code |
| inferSpatial.plot | Man page Source code |
| inferSpotlight | Man page Source code |
| jaccard | Man page Source code |
| moduleSurfacePlotServer | Man page Source code |
| moduleSurfacePlotUI | Man page Source code |
| plot2DInterpolation | Man page |
| plotCNV | Man page Source code |
| plotCNV.RefMode | Man page |
| plotCNVPoints | Man page |
| plotColorOverlap | Man page |
| plotCoverage | Man page Source code |
| plotEnhancedCluster | Man page Source code |
| plotEnhancedNucleusFeature | Man page Source code |
| plotHeatmap | Man page Source code |
| plotJuxtaposition | Man page Source code |
| plotJuxtapositionSPATA | Man page Source code |
| plotSNVtype | Man page Source code |
| plotSPATAEnhancer | Man page Source code |
| plotStreamlines | Man page |
| plotSurfaceInteractiveSingleCell | Man page Source code |
| plotSurfaceMixed | Man page |
| plotVectorFields | Man page Source code |
| rnmf | Man page |
| run.SNN.stability | Man page Source code |
| runBayesSpace | Man page Source code |
| runCNV.Coverage | Man page Source code |
| runCNV.Normalization | Man page Source code |
| runFscore | Man page Source code |
| runFscore.mat | Man page Source code |
| runFullclustervalidation | Man page Source code |
| runMapping | Man page |
| runNMF | Man page |
| runPCAprojection | Man page Source code |
| runRCTD | Man page Source code |
| runSpatialRegression | Man page |
| runSpotwiseSNV | Man page Source code |
| runVectorFields | Man page Source code |
| tab_surface_plots_app | Man page Source code |
| tab_surface_plots_return | Man page Source code |
