stickRAW | R Documentation |
A dataset containing genotypes at 100 SNP loci for 100 Three-spined Stickleback collected in 2015 from several locations in the Deschutes River, Oregon, USA. For more information, see Hemstrom et al (in prep).
stickRAW
An object of class data.frame
with 100 rows and 102 columns.
Genotypes noted as two characters representing bases sequenced at a specific site (e.g. "CC" or "GT"). Each SNP occupies one row, each sample occupies on column. Missing data coded as "NN".
Column names refer to the population of origin (first three characters) and the sample ID.
The first three columns contain snp specific meta data:
snp: SNP ID.
chr: Linkage group, essentially chromosome.
position: Position of the SNP along the linkage group, in base pairs.
Hemstrom et al (in prep)
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