Files in hfang-bristol/dcGOR
Analysis of Ontologies and Protein Domain Annotations
DESCRIPTION
LICENSE
NAMESPACE
R/ClassMethod-dcGOR.r
R/dcAlgo.r
R/dcAlgoPredict.r
R/dcAlgoPredictGenome.r
R/dcAlgoPredictMain.r
R/dcAlgoPredictPR.r
R/dcAlgoPropagate.r
R/dcAncestralML.r
R/dcAncestralMP.r
R/dcBuildAnno.r
R/dcBuildInfoDataFrame.r
R/dcBuildOnto.r
R/dcConverter.r
R/dcDAGannotate.r
R/dcDAGdomainSim.r
R/dcDuplicated.r
R/dcEnrichment.r
R/dcFunArgs.r
R/dcList2Matrix.r
R/dcNaivePredict.r
R/dcRDataLoader.r
R/dcRWRpipeline.r
R/dcRWRpredict.r
R/dcSparseMatrix.r
R/dcSplitArch.r
R/dcSubtreeClade.r
R/dcSubtreeTips.r
R/dcSupraBetter.r
R/dcTreeConnectivity.r
R/visEnrichment.r
README.md
data/Ancestral_domainome.RData
data/InterPro.RData
data/InterPro2GOBP.RData
data/InterPro2GOCC.RData
data/InterPro2GOMF.RData
data/Pfam.RData
data/Pfam2GOBP.RData
data/Pfam2GOCC.RData
data/Pfam2GOMF.RData
data/Rfam.RData
data/Rfam2GOBP.RData
data/Rfam2GOCC.RData
data/Rfam2GOMF.RData
data/SCOP.fa.RData
data/SCOP.fa2DO.RData
data/SCOP.fa2EC.RData
data/SCOP.fa2GOBP.RData
data/SCOP.fa2GOCC.RData
data/SCOP.fa2GOMF.RData
data/SCOP.fa2HPMI.RData
data/SCOP.fa2HPON.RData
data/SCOP.fa2HPPA.RData
data/SCOP.fa2KW.RData
data/SCOP.fa2MP.RData
data/SCOP.fa2UP.RData
data/SCOP.sf.RData
data/SCOP.sf2DO.RData
data/SCOP.sf2EC.RData
data/SCOP.sf2GOBP.RData
data/SCOP.sf2GOCC.RData
data/SCOP.sf2GOMF.RData
data/SCOP.sf2HPMI.RData
data/SCOP.sf2HPON.RData
data/SCOP.sf2HPPA.RData
data/SCOP.sf2KW.RData
data/SCOP.sf2MP.RData
data/SCOP.sf2UP.RData
data/SxOP.fa2MP.RData
data/eTOL.RData
data/onto.CC.RData
data/onto.CD.RData
data/onto.DO.RData
data/onto.EC.RData
data/onto.FA.RData
data/onto.FP.RData
data/onto.GOBP.RData
data/onto.GOCC.RData
data/onto.GOMF.RData
data/onto.HPMI.RData
data/onto.HPON.RData
data/onto.HPPA.RData
data/onto.KW.RData
data/onto.MP.RData
data/onto.PAN.RData
data/onto.PDE.RData
data/onto.UP.RData
data/onto.WP.RData
data/onto.XAN.RData
data/onto.XDE.RData
data/onto.YP.RData
data/onto.ZA.RData
inst/CITATION
inst/NEWS
inst/staticdocs/CITATIONs.md
inst/staticdocs/INSTALLATIONs.md
inst/staticdocs/RData.md
inst/staticdocs/README.md
inst/staticdocs/demo/AlgoPred.r
inst/staticdocs/demo/Basu.r
inst/staticdocs/demo/Customisation.r
inst/staticdocs/demo/Fang.r
inst/staticdocs/demo/Fang_paper.r
inst/staticdocs/demo/List_demos.txt
inst/staticdocs/docs.r
inst/staticdocs/faq/List_faqs.txt
inst/staticdocs/images/dcGOR_logo.png
inst/staticdocs/images/dcGOR_workflow.png
inst/staticdocs/templates/footer.html
inst/staticdocs/templates/navbar.html
man/AdjData-class.Rd
man/Ancestral_domainome.Rd
man/Anno-class.Rd
man/Anno-method.Rd
man/AnnoData-class.Rd
man/Cnetwork-class.Rd
man/Cnetwork-method.Rd
man/Coutput-class.Rd
man/Coutput-method.Rd
man/Dnetwork-class.Rd
man/Dnetwork-method.Rd
man/Eoutput-class.Rd
man/Eoutput-method.Rd
man/Feature2GOBP.interpro.Rd
man/Feature2GOBP.pfam.Rd
man/Feature2GOBP.sf.Rd
man/Feature2GOCC.interpro.Rd
man/Feature2GOCC.pfam.Rd
man/Feature2GOCC.sf.Rd
man/Feature2GOMF.interpro.Rd
man/Feature2GOMF.pfam.Rd
man/Feature2GOMF.sf.Rd
man/Feature2HPPA.interpro.Rd
man/Feature2HPPA.pfam.Rd
man/Feature2HPPA.sf.Rd
man/InfoDataFrame-class.Rd
man/InfoDataFrame-method.Rd
man/InterPro.Rd
man/InterPro2GOBP.Rd
man/InterPro2GOCC.Rd
man/InterPro2GOMF.Rd
man/Onto-class.Rd
man/Onto-method.Rd
man/Pfam.Rd
man/Pfam2GOBP.Rd
man/Pfam2GOCC.Rd
man/Pfam2GOMF.Rd
man/Rfam.Rd
man/Rfam2GOBP.Rd
man/Rfam2GOCC.Rd
man/Rfam2GOMF.Rd
man/SCOP.fa.Rd
man/SCOP.fa2DO.Rd
man/SCOP.fa2EC.Rd
man/SCOP.fa2GOBP.Rd
man/SCOP.fa2GOCC.Rd
man/SCOP.fa2GOMF.Rd
man/SCOP.fa2HPMI.Rd
man/SCOP.fa2HPON.Rd
man/SCOP.fa2HPPA.Rd
man/SCOP.fa2KW.Rd
man/SCOP.fa2MP.Rd
man/SCOP.fa2UP.Rd
man/SCOP.sf.Rd
man/SCOP.sf2DO.Rd
man/SCOP.sf2EC.Rd
man/SCOP.sf2GOBP.Rd
man/SCOP.sf2GOCC.Rd
man/SCOP.sf2GOMF.Rd
man/SCOP.sf2HPMI.Rd
man/SCOP.sf2HPON.Rd
man/SCOP.sf2HPPA.Rd
man/SCOP.sf2KW.Rd
man/SCOP.sf2MP.Rd
man/SCOP.sf2UP.Rd
man/dcAlgo.Rd
man/dcAlgoPredict.Rd
man/dcAlgoPredictGenome.Rd
man/dcAlgoPredictMain.Rd
man/dcAlgoPredictPR.Rd
man/dcAlgoPropagate.Rd
man/dcAncestralML.Rd
man/dcAncestralMP.Rd
man/dcBuildAnno.Rd
man/dcBuildInfoDataFrame.Rd
man/dcBuildOnto.Rd
man/dcConverter.Rd
man/dcDAGannotate.Rd
man/dcDAGdomainSim.Rd
man/dcDuplicated.Rd
man/dcEnrichment.Rd
man/dcFunArgs.Rd
man/dcList2Matrix.Rd
man/dcNaivePredict.Rd
man/dcRDataLoader.Rd
man/dcRWRpipeline.Rd
man/dcRWRpredict.Rd
man/dcSparseMatrix.Rd
man/dcSplitArch.Rd
man/dcSubtreeClade.Rd
man/dcSubtreeTips.Rd
man/dcSupraBetter.Rd
man/dcTreeConnectivity.Rd
man/eTOL.Rd
man/onto.DO.Rd
man/onto.EC.Rd
man/onto.GOBP.Rd
man/onto.GOCC.Rd
man/onto.GOMF.Rd
man/onto.HPMI.Rd
man/onto.HPON.Rd
man/onto.HPPA.Rd
man/onto.KW.Rd
man/onto.MP.Rd
man/onto.UP.Rd
man/visEnrichment.Rd
