summariseRjpp: summariseRjpp This functions takes the somewhat massive...
In hferg/BTprocessR: A set of tools to help with the interpretation and analysis of the output of BayesTraits MCMC analyses.
Description
summariseRjpp
This functions takes the somewhat massive output of the rjpp function and
pares it down to the scalars and/or rates the user is interested in.
QUESTION: Should this be limited to a single scalar type? That would include
the rates and the origins?
QUESTION: Is threshold important here? Or could that be in the autoplot
method?
Usage
1
summariseRjpp(PP, scalar)
Arguments
scalar
The scalar to summarise the results of. Either:
node_scalar, branch_scalar, rate, lambda, delta, kappa or node_branch
pp
An object of class "rjpp" - typically the output of the rjpp
function.
threshold
The probability threshold over which scalars will be show.
When equal to zero ALL scalars in the posterior will be returned. When equal
to 0.5 only scalars present in greater than 50
returned, and so on.
hferg/BTprocessR documentation built on March 8, 2020, 11:45 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description
summariseRjpp This functions takes the somewhat massive output of the rjpp function and pares it down to the scalars and/or rates the user is interested in. QUESTION: Should this be limited to a single scalar type? That would include the rates and the origins? QUESTION: Is threshold important here? Or could that be in the autoplot method?
Usage
1 | summariseRjpp(PP, scalar)
|
Arguments
scalar |
The scalar to summarise the results of. Either: node_scalar, branch_scalar, rate, lambda, delta, kappa or node_branch |
pp |
An object of class "rjpp" - typically the output of the rjpp function. |
threshold |
The probability threshold over which scalars will be show. When equal to zero ALL scalars in the posterior will be returned. When equal to 0.5 only scalars present in greater than 50 returned, and so on. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.