Description Usage Arguments Value Examples
A function to extract the marginal likelihood from the stepping stone sampler output of two BayesTraits runs, and work out the (NOT log) Bayes Factors.
1 | compareStones(comp, simp)
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comp |
The name of the stepping stones log file of the more complex of the two BayesTraits models. |
simp |
The name of the stepping stone log file of the more simple of the two BayesTraits models. |
The Bayes factor of the comparison between the more complex and the more simple model. This is not logged for saftey (e.g. in the case of a negative difference between complex and simple model).
1 | compareStones("complex.model.stones.log.txt", "simple.model.stones.log.txt")
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