loadRJdisc: loadRJdisc

Description Usage Arguments Value

Description

Returns the full mcmc object from a BayesTraits discrete model log file. This is used inside plot functions and so on, but might be useful for other MCMC manipulations and so on.

Usage

1
loadRJdisc(logfile, burnin = 0, thinning = 1)

Arguments

logfile

The name of the logfile of the BayesTraits analysis.

burnin

burning

thinning

Thin the sample by ever n sample.

Value

A list containing the taxa translation table, all possible subtrees a scalar can occur on, and a data frame of the rj model configuration.


hferg/hfgr documentation built on May 17, 2019, 3:56 p.m.