Files in hputter/mstate
Data Preparation, Estimation and Prediction in Multi-State Models
.Rbuildignore
.gitignore
DESCRIPTION
MD5
NAMESPACE
NEWS.md
R/ELOS.R
R/LMAJ.R
R/MarkovTest.R
R/create.wData.omega.R
R/crprep.R
R/cuminc.R
R/cutLMms.R
R/datasets.R
R/etm2msdata.R
R/events.R
R/expand.covs.R
R/ggplot.Cuminc.R
R/ggplot.helpers.R
R/ggplot.msfit.R
R/ggplot.probtrans.R
R/imports.R
R/misc.R
R/msboot.R
R/msfit.R
R/msprep.R
R/mssample.R
R/paths.R
R/plot.Cuminc.R
R/plot.MarkovTest.R
R/plot.msfit.R
R/plot.probtrans.R
R/print.Cuminc.R
R/print.MarkovTest.R
R/print.msdata.R
R/probtrans.R
R/redrank.R
R/relsurv.haz_function.R
R/relsurv.match.ratetable.R
R/relsurv.msboot.relsurv.R
R/relsurv.msboot.relsurv.boot.R
R/relsurv.msfit.relsurv.R
R/relsurv.rformulate.R
R/relsurv.transMat.R
R/relsurv.varHaz.fixed.R
R/summary.Cuminc.R
R/summary.msfit.R
R/summary.probtrans.R
R/trans.R
R/transMat.R
R/transhelp.R
R/vis.mirror.pt.R
R/vis.multiple.pt.R
R/xsect.R
README.md
_pkgdown.yml
data/aidssi.RData
data/aidssi2.RData
data/bmt.RData
data/ebmt1.RData
data/ebmt2.RData
data/ebmt3.RData
data/ebmt4.RData
data/prothr.RData
docs/404.html
docs/articles/index.html
docs/articles/visuals_demo.html
docs/articles/visuals_demo_files/accessible-code-block-0.0.1/empty-anchor.js
docs/articles/visuals_demo_files/anchor-sections-1.0/anchor-sections.css
docs/articles/visuals_demo_files/anchor-sections-1.0/anchor-sections.js
docs/articles/visuals_demo_files/figure-html/mirror1-1.png
docs/articles/visuals_demo_files/figure-html/mirror2-1.png
docs/articles/visuals_demo_files/figure-html/msfitplot_base_1-1.png
docs/articles/visuals_demo_files/figure-html/msfitplot_base_2-1.png
docs/articles/visuals_demo_files/figure-html/msfitplot_confint1-1.png
docs/articles/visuals_demo_files/figure-html/msfitplot_confint2-1.png
docs/articles/visuals_demo_files/figure-html/msfitplot_customs-1.png
docs/articles/visuals_demo_files/figure-html/msfitplot_customs-2.png
docs/articles/visuals_demo_files/figure-html/msfitplot_ggplot2_1-1.png
docs/articles/visuals_demo_files/figure-html/msfitplot_ggplot_2-1.png
docs/articles/visuals_demo_files/figure-html/msfitplot_ggplot_2-2.png
docs/articles/visuals_demo_files/figure-html/plot.Cuminc1-1.png
docs/articles/visuals_demo_files/figure-html/plot.cuminc_x-1.png
docs/articles/visuals_demo_files/figure-html/plot.cuminc_x-2.png
docs/articles/visuals_demo_files/figure-html/plot_pt_filled1-1.png
docs/articles/visuals_demo_files/figure-html/plot_pt_filled2-1.png
docs/articles/visuals_demo_files/figure-html/plot_pt_filled3-1.png
docs/articles/visuals_demo_files/figure-html/plot_pt_filled4-1.png
docs/articles/visuals_demo_files/figure-html/plot_pt_separate1-1.png
docs/articles/visuals_demo_files/figure-html/plot_pt_separate2-1.png
docs/articles/visuals_demo_files/figure-html/plot_pt_single1-1.png
docs/articles/visuals_demo_files/figure-html/plot_pt_single2-1.png
docs/articles/visuals_demo_files/figure-html/plot_pt_single3-1.png
docs/articles/visuals_demo_files/figure-html/plot_pt_stacked-1.png
docs/articles/visuals_demo_files/figure-html/vis_multiple_plot-1.png
docs/articles/visuals_demo_files/figure-html/vis_multiple_plot2-1.png
docs/authors.html
docs/bootstrap-toc.css
docs/bootstrap-toc.js
docs/deps/bootstrap-5.3.1/bootstrap.bundle.min.js
docs/deps/bootstrap-5.3.1/bootstrap.bundle.min.js.map
docs/deps/bootstrap-5.3.1/bootstrap.min.css
docs/deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js
docs/deps/clipboard.js-2.0.11/clipboard.min.js
docs/deps/data-deps.txt
docs/deps/font-awesome-6.5.2/css/all.css
docs/deps/font-awesome-6.5.2/css/all.min.css
docs/deps/font-awesome-6.5.2/css/v4-shims.css
docs/deps/font-awesome-6.5.2/css/v4-shims.min.css
docs/deps/font-awesome-6.5.2/webfonts/fa-brands-400.ttf
docs/deps/font-awesome-6.5.2/webfonts/fa-brands-400.woff2
docs/deps/font-awesome-6.5.2/webfonts/fa-regular-400.ttf
docs/deps/font-awesome-6.5.2/webfonts/fa-regular-400.woff2
docs/deps/font-awesome-6.5.2/webfonts/fa-solid-900.ttf
docs/deps/font-awesome-6.5.2/webfonts/fa-solid-900.woff2
docs/deps/font-awesome-6.5.2/webfonts/fa-v4compatibility.ttf
docs/deps/font-awesome-6.5.2/webfonts/fa-v4compatibility.woff2
docs/deps/headroom-0.11.0/headroom.min.js
docs/deps/headroom-0.11.0/jQuery.headroom.min.js
docs/deps/jquery-3.6.0/jquery-3.6.0.js
docs/deps/jquery-3.6.0/jquery-3.6.0.min.js
docs/deps/jquery-3.6.0/jquery-3.6.0.min.map
docs/deps/search-1.0.0/autocomplete.jquery.min.js
docs/deps/search-1.0.0/fuse.min.js
docs/deps/search-1.0.0/mark.min.js
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/katex-auto.js
docs/lightswitch.js
docs/link.svg
docs/news/index.html
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/EBMT-cause-of-death-data.html
docs/reference/EBMT-data.html
docs/reference/EBMT-platelet-recovery-data.html
docs/reference/EBMT-year-of-relapse-data.html
docs/reference/ELOS.html
docs/reference/LMAJ-1.png
docs/reference/LMAJ.html
docs/reference/Liver-cirrhosis-data.html
docs/reference/MarkovTest-1.png
docs/reference/MarkovTest-2.png
docs/reference/MarkovTest.html
docs/reference/Rplot001.png
docs/reference/Rplot002.png
docs/reference/Rplot003.png
docs/reference/Rplot004.png
docs/reference/absorbing.html
docs/reference/aidssi.html
docs/reference/aidssi2.html
docs/reference/bmt.html
docs/reference/crprep.default-1.png
docs/reference/crprep.default-2.png
docs/reference/crprep.default.html
docs/reference/crprep.html
docs/reference/cuminc.html
docs/reference/cutLMms.html
docs/reference/ebmt1.html
docs/reference/ebmt2.html
docs/reference/ebmt3.html
docs/reference/ebmt4.html
docs/reference/etm2msdata.html
docs/reference/events.html
docs/reference/expand.covs.default.html
docs/reference/expand.covs.html
docs/reference/expand.covs.msdata.html
docs/reference/haz_function.html
docs/reference/index.html
docs/reference/is.circular.html
docs/reference/modify_transMat.html
docs/reference/msboot.html
docs/reference/msboot.relsurv.boot.html
docs/reference/msboot.relsurv.html
docs/reference/msdata2etm.html
docs/reference/msfit.html
docs/reference/msfit.relsurv.html
docs/reference/msprep.html
docs/reference/mssample.html
docs/reference/mstate-package.html
docs/reference/mstate.html
docs/reference/optimal_weights_matrix.html
docs/reference/optimal_weights_multiple.html
docs/reference/paths.html
docs/reference/plot.Cuminc-1.png
docs/reference/plot.Cuminc-2.png
docs/reference/plot.Cuminc.html
docs/reference/plot.MarkovTest.html
docs/reference/plot.msfit-1.png
docs/reference/plot.msfit-2.png
docs/reference/plot.msfit-3.png
docs/reference/plot.msfit-4.png
docs/reference/plot.msfit.html
docs/reference/plot.probtrans-1.png
docs/reference/plot.probtrans-2.png
docs/reference/plot.probtrans-3.png
docs/reference/plot.probtrans-4.png
docs/reference/plot.probtrans.html
docs/reference/print.Cuminc.html
docs/reference/print.MarkovTest.html
docs/reference/print.msdata.html
docs/reference/print.summary.msfit.html
docs/reference/print.summary.probtrans.html
docs/reference/probtrans.html
docs/reference/prothr.html
docs/reference/redrank.html
docs/reference/summary.Cuminc.html
docs/reference/summary.msfit.html
docs/reference/summary.probtrans.html
docs/reference/to.trans2.html
docs/reference/tra2trans.html
docs/reference/trans.comprisk.html
docs/reference/trans.illdeath.html
docs/reference/trans2Q.html
docs/reference/trans2tra.html
docs/reference/transMat.html
docs/reference/transhelp.html
docs/reference/varHaz.fixed.html
docs/reference/vis.mirror.pt-1.png
docs/reference/vis.mirror.pt.html
docs/reference/vis.multiple.pt-1.png
docs/reference/vis.multiple.pt.html
docs/reference/xsect.html
docs/search.json
docs/sitemap.xml
inst/CITATION
man/Cuminc.Rd
man/EBMT-cause-of-death-data.Rd
man/EBMT-data.Rd
man/EBMT-platelet-recovery-data.Rd
man/EBMT-year-of-relapse-data.Rd
man/ELOS.Rd
man/LMAJ.Rd
man/Liver-cirrhosis-data.Rd
man/MarkovTest.Rd
man/aidssi.Rd
man/bmt.Rd
man/crprep.default.Rd
man/cutLMms.Rd
man/etm2msdata.Rd
man/events.Rd
man/expand.covs.Rd
man/expand.covs.msdata.Rd
man/haz_function.Rd
man/modify_transMat.Rd
man/msboot.Rd
man/msboot.relsurv.Rd
man/msboot.relsurv.boot.Rd
man/msdata2etm.Rd
man/msfit.Rd
man/msfit.relsurv.Rd
man/msprep.Rd
man/mssample.Rd
man/mstate-package.Rd
man/paths.Rd
man/plot.Cuminc.Rd
man/plot.MarkovTest.Rd
man/plot.msfit.Rd
man/plot.probtrans.Rd
man/print.MarkovTest.Rd
man/print.msdata.Rd
man/print.summary.msfit.Rd
man/print.summary.probtrans.Rd
man/probtrans.Rd
man/redrank.Rd
man/summary.Cuminc.Rd
man/summary.msfit.Rd
man/summary.probtrans.Rd
man/trans2tra.Rd
man/transMat.Rd
man/transhelp.Rd
man/varHaz.fixed.Rd
man/vis.mirror.pt.Rd
man/vis.multiple.pt.Rd
man/xsect.Rd
mstate.Rproj
src-i386/agmssurv.c
src-i386/agmssurv.o
src-i386/mstate_init.c
src-i386/mstate_init.o
src/agmssurv.c
src/mstate_init.c
vignettes/Tutorial.Rnw
vignettes/Tutorial.bib
vignettes/visuals_demo.Rmd
