estomega: Estimation of over-dispersion parameter omega

In hr1912/phyExp: the R package for analyzing expression evolution based on RNA-seq data

Usage

estomega(objects = NULL, overwrite = TRUE)

Arguments

objects	a vector of objects of class taxonExp or an object of class taxaExp
overwrite	a logical specifying whether to overwrite the existing omega value stored in the taxonExp objects

References

Gu,X. et al. 2013. Phylogenomic distance method for analyzing transcriptome evolution based on RNA-seq data. Genome Biol Evol, 5, 1746-1753.

Examples

data(tetraexp)
tetraexp.objects.with.omega <- estomega(tetraexp.objects)
tetraexp.objects.with.omega[[1]]$omega

hr1912/phyExp documentation built on July 13, 2019, 5:18 p.m.