echoseq-package: echoseq: a package for faithful replications and simulations...
In hruffieux/echoseq: Replication and Simulation of Genetic Variants, Molecular Expression Levels and Other Phenotypic Data
echoseq-package R Documentation
echoseq: a package for faithful replications and simulations of genetic
variants, molecular expression levels and other phenotypic data
Description
The echoseq package provides functions to emulate molecular quantitative trait
locus data and clinical data associated with genetic variants under
user-specified association patterns. The data can be the result of pure
simulation or can replicate real datasets supplied by the user (which may
replace real data when these cannots be shared for diverse privacy reasons).
The data generation schemes are based on generally accepted principles of
population genetics (Hardy–Weinberg equilibrium, linkage-disequilibrium,
natural selection, pleiotropic control, sparsity assumptions).
echoseq functions
convert_snps, convert_phenos, generate_dependence,
generate_phenos, generate_snps, replicate_real_phenos, replicate_real_snps.
hruffieux/echoseq documentation built on Jan. 10, 2024, 10:06 p.m.
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| echoseq-package | R Documentation |
echoseq: a package for faithful replications and simulations of genetic variants, molecular expression levels and other phenotypic data
Description
The echoseq package provides functions to emulate molecular quantitative trait locus data and clinical data associated with genetic variants under user-specified association patterns. The data can be the result of pure simulation or can replicate real datasets supplied by the user (which may replace real data when these cannots be shared for diverse privacy reasons). The data generation schemes are based on generally accepted principles of population genetics (Hardy–Weinberg equilibrium, linkage-disequilibrium, natural selection, pleiotropic control, sparsity assumptions).
echoseq functions
convert_snps, convert_phenos, generate_dependence, generate_phenos, generate_snps, replicate_real_phenos, replicate_real_snps.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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