Files in hsinyenwu/RiboPlotR
Plot Periodicity of Ribosome Profiling Data
.DS_Store
.Rbuildignore
.gitignore
ASpli_binFeatures.log
DESCRIPTION
NAMESPACE
R/.DS_Store
R/code.R
README.md
RiboPlotR.Rproj
Rplot.pdf
example/exons/exon.counts.tab
example/exons/exon.rd.tab
example/genes/gene.counts.tab
example/genes/gene.rd.tab
example/introns/e1i.counts.tab
example/introns/ie2.counts.tab
example/introns/intron.counts.tab
example/introns/intron.rd.tab
example/junctions/junction.counts.tab
image/.DS_Store
image/AT4G21910.png
image/AT4G21910_isoform2.png
image/Plotting-style.png
image/SAMDC_PLOTt2.png
image/SAMDC_PLOTt_Root.png
image/SAMDC_Root_Shoot.png
image/SAMDC_root_uORF_PLOTc.png
image/SAMDC_root_uORF_PLOTc2.png
image/SAMDC_shoot.png
inst/.DS_Store
inst/extdata/.DS_Store
inst/extdata/AT3G02468.gtf
inst/extdata/Root_test_PE.bam
inst/extdata/Root_test_PE.bam.bai
inst/extdata/Root_test_SE.bam
inst/extdata/Root_test_SE.bam.bai
inst/extdata/Shoot_test_PE.bam
inst/extdata/Shoot_test_PE.bam.bai
inst/extdata/Shoot_test_SE.bam
inst/extdata/Shoot_test_SE.bam.bai
inst/extdata/TAIR10.29_part.gtf
inst/extdata/riboRoot.bed
inst/extdata/riboShoot.bed
man/.DS_Store
man/PLOTc.Rd
man/PLOTc2.Rd
man/PLOTch2.Rd
man/PLOTch3.Rd
man/PLOTg.Rd
man/PLOTt.Rd
man/PLOTt2.Rd
man/count_CDS_reads.Rd
man/count_uORF_CDS_reads.Rd
man/firstInFramePSitePerExonNegative.Rd
man/firstInFramePSitePerExonPositive.Rd
man/gene.structure.Rd
man/p_site_Y_max.Rd
man/p_site_plot_genome.Rd
man/p_site_plot_p.Rd
man/p_site_plot_p2.Rd
man/plotGeneModel.Rd
man/plotRanges.Rd
man/rna_bam.ribo.Rd
man/rna_bam.ribo3.Rd
man/uorf.structure.Rd
whatever.pdf
