normalizeMotifs_otherRownames: Normalize Somatic Motifs with different rownames

Description Usage Arguments Value Examples

View source: R/complex_functions.R

Description

This is a wrapper function to normalizeMotifs. The rownames are first transformed to fit the convention of the SomaticSignatures package and then passed on to the above mentioned function.

Usage

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normalizeMotifs_otherRownames(in_matrix, in_norms, adjust_counts = TRUE)

Arguments

in_matrix, in_norms

Arguments to normalizeMotifs

adjust_counts

Whether to rescale the counts after adaption or not. Default is true.

Value

The matrix returned by normalizeMotifs, but with rownames transformed back to the convention of the input

Examples

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huebschm/YAPSA documentation built on May 17, 2019, 9:11 p.m.