plotExchangeSpectra: Plot the spectra of nucleotide exchanges

In huebschm/YAPSA: Yet Another Package for Signature Analysis

Description

Plots the spectra of nucleotide exchanges in their triplet contexts. If several columns are present in the input data frame, the spectra are plotted for every column separately.

Usage

plotExchangeSpectra(in_catalogue_df, in_colour_vector = NULL,
  in_show_triplets = FALSE, in_show_axis_title = FALSE)

Arguments

in_catalogue_df	Numerical data frame encoding the exchange spectra to be displayed, either a mutational catalogue V or a signatures matrix W.
in_colour_vector	Specifies the colours of the 6 nucleotide exchanges if non-null.
in_show_triplets	Whether or not to show the triplets on the x-axis
in_show_axis_title	Whether or not to show the name of the y-axis

Value

The generated barplot - a ggplot2 plot

See Also

geom_bar

facet_grid

Examples

 NULL

huebschm/YAPSA documentation built on May 17, 2019, 9:11 p.m.