hpoPhecodeMap: Mapping of HPO terms and phecodes
In hugheylab/phers: Calculate Phenotype Risk Scores
hpoPhecodeMap R Documentation
Mapping of HPO terms and phecodes
Description
This table provides a mapping between Human Phenotype Ontology (HPO)
terms and phecodes, and is useful for using phecodes to represent the
clinical features of Mendelian diseases (version 1.2).
Usage
hpoPhecodeMap
Format
A data.table with the following columns:
-
hpo_term_id: Character vector of HPO term identifiers
-
hpo_term_name: Character vector of HPO term descriptions
-
phecode: Character vector of phecodes
-
phecode_name: Character vector of phecode descriptions
See Also
mapDiseaseToPhecode()
hugheylab/phers documentation built on April 24, 2023, 10:26 a.m.
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| hpoPhecodeMap | R Documentation |
Mapping of HPO terms and phecodes
Description
This table provides a mapping between Human Phenotype Ontology (HPO) terms and phecodes, and is useful for using phecodes to represent the clinical features of Mendelian diseases (version 1.2).
Usage
hpoPhecodeMap
Format
A data.table with the following columns:
-
hpo_term_id: Character vector of HPO term identifiers -
hpo_term_name: Character vector of HPO term descriptions -
phecode: Character vector of phecodes -
phecode_name: Character vector of phecode descriptions
See Also
mapDiseaseToPhecode()
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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