Meta-analysis of Gene Set differential Co-expression Analysis

bootstrapP | Append final two bootstrap statistics |

check_sd | Check gene-wise STD of each one matrix |

dichotGSAR | Dichotomize p-value matrix to 0-1 matrix for each PW across... |

GSAR_boot | Perform differential coexpression analysis on original and... |

GSARboot_format | Assemble GSNACA results on original dataset and bootstrap... |

gsnca_gsets | Run GSNCA over multiple gene sets |

gsnca_p | Gene Sets Net Correlation Analysis (GSNCA) including... |

gsnca_stat | Test statistics of Gene Sets Net Correlation Analysis (GSNCA) |

input2PWcTalk | Example input data to pathway crosstalk analysis |

meta | Minimum example inputs to MetaGSCA function |

metaAndPlot | Perform GLMM or inverse variance meta-analysis |

MetaGSCA | Meta-analysis of differential coexpression analysis |

MetaGSCA_plot | Draw Forest plot based on metaprop() result |

PWcTalk | Streamlined functions for Pathway Crosstalk Network analysis |

PWcTalkNW | Draw pathway crosstalk network given a finite set of pathway... |

PWcTalkNWpre | Cascaded steps in pathway crosstalk analyis prior to network... |

PWsim | Calculate similarity measure for every pair of PWs |

PWsimDichot | Dichotomize p-values of PW pairs according to pair p... |

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