dichotGSAR: Dichotomize p-value matrix to 0-1 matrix for each PW across...
In hui-sheen/MetaGSCA: Meta-analysis of Gene Set differential Co-expression Analysis
dichotGSAR R Documentation
Dichotomize p-value matrix to 0-1 matrix for each PW across datasets��output metaP and metaFDR as well.
Description
Dichotomize p-value matrix to 0-1 matrix for each PW across datasets��output metaP and metaFDR as well.
Usage
dichotGSAR(input2PWcTalk, pTh.dataset = 0.01)
Arguments
input2PWcTalk
File name of the CSV output file from prior metaGSAR analysis. This file includes k p-values for each pathway represented in rows (k: number of repetitive datasets). Several columns of meta-P values follow the dataset-specific p-value columns.
pTh.dataset
cutoff value to dichotomize the continuous p-value from preceding MetaGSCA analysis. Low/significant p's are converted to 1's.
hui-sheen/MetaGSCA documentation built on April 9, 2022, 7:24 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| dichotGSAR | R Documentation |
Dichotomize p-value matrix to 0-1 matrix for each PW across datasets��output metaP and metaFDR as well.
Description
Dichotomize p-value matrix to 0-1 matrix for each PW across datasets��output metaP and metaFDR as well.
Usage
dichotGSAR(input2PWcTalk, pTh.dataset = 0.01)
Arguments
input2PWcTalk |
File name of the CSV output file from prior metaGSAR analysis. This file includes k p-values for each pathway represented in rows (k: number of repetitive datasets). Several columns of meta-P values follow the dataset-specific p-value columns. |
pTh.dataset |
cutoff value to dichotomize the continuous p-value from preceding MetaGSCA analysis. Low/significant p's are converted to 1's. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.