classify_splicing_code: This function take the input of rMATS...
In huqiwen0313/HM_splicing: Random forest based approach for detecting regulatory histone marks associated with splicing patterns
Description
Usage
Arguments
Value
View source: R/data.processing.R
Description
This function take the input of rMATS (http://rnaseq-mats.sourceforge.net/user_guide.htm#output)
or rMATS HM files and calssify alternative spliced exons into different
categories (splicing codes): gain (0), loss (1), High (2) and Low (3)
Usage
1
classify_splicing_code(SE_file)
Arguments
SE_file:
rMAT result or rMAST result with HM signal at the end
Value
File with a class label indicates splicing codes
huqiwen0313/HM_splicing documentation built on May 5, 2020, 12:36 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value
View source: R/data.processing.R
Description
This function take the input of rMATS (http://rnaseq-mats.sourceforge.net/user_guide.htm#output) or rMATS HM files and calssify alternative spliced exons into different categories (splicing codes): gain (0), loss (1), High (2) and Low (3)
Usage
1 | classify_splicing_code(SE_file)
|
Arguments
SE_file: |
rMAT result or rMAST result with HM signal at the end |
Value
File with a class label indicates splicing codes
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.