elimExpr-class: Class "elimExpr"

In hxin/topOnto: ontology enrichment analysis

Description

Classes that extend the "classicExpr" class by adding a slot representing the members that need to be removed.

Objects from the Class

Objects can be created by calls of the form new("elimExpr", testStatistic, name, groupMembers, exprDat, pType, elim, cutOff, ...). ~~ describe objects here ~~

Slots

cutOff:

Object of class "numeric" ~~

elim:

Object of class "integer" ~~

eData:

Object of class "environment" ~~

pType:

Object of class "factor" ~~

name:

Object of class "character" ~~

allMembers:

Object of class "character" ~~

members:

Object of class "character" ~~

testStatistic:

Object of class "function" ~~

testStatPar:

Object of class "list" ~~

Extends

Class "weight01Expr", directly. Class "classicExpr", by class "weight01Expr", distance 2. Class "groupStats", by class "weight01Expr", distance 3.

Methods

cutOff<-

signature(object = "elimExpr"): ...

cutOff

signature(object = "elimExpr"): ...

getSigGroups

signature(object = "topONTdata", test.stat = "elimExpr"): ...

initialize

signature(.Object = "elimExpr"): ...

Author(s)

Adrian Alexa

See Also

classicScore-class, groupStats-class, getSigGroups-methods

Examples

showClass("elimExpr")

hxin/topOnto documentation built on May 17, 2019, 9:15 p.m.