get_biomass_flux_position: Get biomass flux position
In i3bionet/CoRegFlux: CoRegFlux
Description
Usage
Arguments
Value
Examples
Description
Get biomass flux position
Usage
1
2
get_biomass_flux_position(model, biomass_reaction_id = "biomass",
biomass_reaction_name = NULL)
Arguments
model
An object of class modelOrg, the genome scale metabolic model
biomass_reaction_id
Default value "biomass"
biomass_reaction_name
Optional, the react_name in the modelOrg under
which the biomass function can be found, such as "growth"
Value
the position of the biomass generating reaction according the the
objective
in our case we had the biomass reactions for models iMM904 and iTO977
Examples
1
2
data("iMM904")
get_biomass_flux_position(iMM904)
i3bionet/CoRegFlux documentation built on May 31, 2019, 1:50 a.m.
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Description Usage Arguments Value Examples
Description
Get biomass flux position
Usage
1 2 | get_biomass_flux_position(model, biomass_reaction_id = "biomass",
biomass_reaction_name = NULL)
|
Arguments
model |
An object of class modelOrg, the genome scale metabolic model |
biomass_reaction_id |
Default value "biomass" |
biomass_reaction_name |
Optional, the react_name in the modelOrg under which the biomass function can be found, such as "growth" |
Value
the position of the biomass generating reaction according the the objective in our case we had the biomass reactions for models iMM904 and iTO977
Examples
1 2 | data("iMM904")
get_biomass_flux_position(iMM904)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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