filterClusters: Mapped cluster filter

Description Usage Arguments Value Examples

View source: R/filterClusters.R

Description

Filter mapped clusters by following criteria:

Usage

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filterClusters(table, min_main_cluster_freq = 0.6)

Arguments

table

data.table with original cluster information

min_main_cluster_freq

Numeric between 0 and 1. Minimum frequency of a transition group id matched to the same cluster. Default is 0.6.

Value

data.table Same as input table but including extra columns about run coverage information and filtered by min_main_cluster_freq.

Examples

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data <- fullDataMapped
filteredData <- filterData(data,
                           min_main_cluster_freq = 0.6)

ibludau/clusterMapper documentation built on May 18, 2019, 9:17 p.m.