generateMatrix: Generate final output matrix

In ibludau/clusterMapper:

Description

Merge input data with mapped and filtered results.

Usage

generateMatrix(rawInput, processedData)

Arguments

rawInput	data.table with original cluster information.
processedData	data.table with mapped and filtered clutsre information.

Value

data.table Same as input table but including extra columns with new_cluster information.

Examples

data <- exampleData
filteredData <- filterData(data,
                           min_run_coverage = 0.6)
mappedData <- mapClusters(filteredData)
mappedDataFiltered <- filterClusters(mappedData,
                                     min_main_cluster_freq = 0.6)
finalData <- generateMatrix(rawInput = data,
                            processedData = mappedDataFiltered)

ibludau/clusterMapper documentation built on May 18, 2019, 9:17 p.m.