addPairDist: Add linear distance between gene paires or NA if on differnet...
In ibn-salem/genepair: Functions to Analyse Pairs of Genomic Elements like Genes.
View source: R/genepairFunctions.R
Description
Distance is caluclated based on start positon of genes in basepair and can be
negative, if second gene has a lower start postion than the first gene in
pairs.
Usage
1
addPairDist(gp, genesGR, colname = "dist", ignore.strand = FALSE)
Arguments
gp
data.frame like object with gene pairs. Assumes indexes or names of
ranges in 'genesGR' in the first two columns.
genesGR
A GRanges object.
ibn-salem/genepair documentation built on Aug. 7, 2017, 9:47 a.m.
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View source: R/genepairFunctions.R
Description
Distance is caluclated based on start positon of genes in basepair and can be negative, if second gene has a lower start postion than the first gene in pairs.
Usage
1 | addPairDist(gp, genesGR, colname = "dist", ignore.strand = FALSE)
|
Arguments
gp |
data.frame like object with gene pairs. Assumes indexes or names of ranges in 'genesGR' in the first two columns. |
genesGR |
A |
ibn-salem/genepair documentation built on Aug. 7, 2017, 9:47 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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