Files in idot/deseq2analysis

DESeq2 analysis

.Rbuildignore

.gitignore

DESCRIPTION

NAMESPACE

R/deseq2.R R/deseq2helpers.R R/functional_analysis.R R/import_data.R R/pipe.R R/plots.R README.md TODO.md

example/check.sh

example/rundemo.R

example/test.comparisons.tab

example/test.counts.tab

example/test.ensembl.GRCh38.genes.tab

example/test.grouping.tab

example/test.parameters.yaml

inst/bin/ensembl_totable.py

inst/bin/merge_expression.py

inst/bin/runDeseq2.R inst/deseq2.Rmd inst/deseq2_gc_length.Rmd inst/deseq2_pairwise.Rmd

inst/deseq2_pairwise.tpl

inst/functional_analysis.Rmd

inst/species.csv

inst/testFiles/test.comparisons.tab

inst/testFiles/test.counts.tab

inst/testFiles/test.dds.RDS

inst/testFiles/test.dds.r.RDS

inst/testFiles/test.deseq.m.result.RDS

inst/testFiles/test.deseq.result.RDS

inst/testFiles/test.ensembl.GRCh38.genes.tab

inst/testFiles/test.grouping.tab

inst/testFiles/test.grouping.wrong.tab

inst/testFiles/test.parameters.yaml

tests/testthat.R tests/testthat/helper.R tests/testthat/test_deseq2helpers.R tests/testthat/test_import.R

idot/deseq2analysis documentation built on Aug. 14, 2021, 5:12 a.m.