sumStatsLtt: LTT summary statistics
In ilajaait/deephylo: Infer Parameters from Phylogenies with Deep-Learning
View source: R/summaryStatistics.R
sumStatsLtt R Documentation
LTT summary statistics
Description
There are 51 LTT summary statistics listed below.
Variable Description
LTT_slopei slope of LTT i-th part in semilog scale (i in [1,10])
LTT_ti i-th time coordinate of binned LTT (i in [1,20])
LTT_Ni i-th lineage coordinate of binned LTT (i in [1,20])
n_tips phylogeny number of tips
Usage
sumStatsLtt(phylo)
Arguments
phylo
phylogeny (ape format)
Value
list
the variable listed above can be accessed with $ + variable name.
See Also
ilajaait/deephylo documentation built on April 10, 2022, 11:03 a.m.
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View source: R/summaryStatistics.R
| sumStatsLtt | R Documentation |
LTT summary statistics
Description
There are 51 LTT summary statistics listed below.
| Variable | Description |
LTT_slopei | slope of LTT i-th part in semilog scale (i in [1,10]) |
LTT_ti | i-th time coordinate of binned LTT (i in [1,20]) |
LTT_Ni | i-th lineage coordinate of binned LTT (i in [1,20]) |
| n_tips | phylogeny number of tips |
Usage
sumStatsLtt(phylo)
Arguments
phylo |
phylogeny (ape format) |
Value
list
the variable listed above can be accessed with $ + variable name.
See Also
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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