Files in immunogenomics/harmony
Fast, Sensitive, and Accurate Integration of Single Cell Data
.Rbuildignore
.gitignore
.travis.yml
CRAN-SUBMISSION
DESCRIPTION
NAMESPACE
NEWS
R/RcppExports.R
R/RunHarmony.R
R/data.R
R/harmony-package.r
R/harmony_option.R
R/ui.R
R/utils.R
README.md
appveyor.yml
cran-comments.md
data/cell_lines.rda
data/cell_lines_small.RData
data/pbmc_stim.RData
doc/Seurat.R
doc/Seurat.Rmd
doc/Seurat.html
doc/detailedWalkthrough.R
doc/detailedWalkthrough.Rmd
doc/detailedWalkthrough.html
doc/parameters.R
doc/parameters.Rmd
doc/parameters.html
doc/quickstart.R
doc/quickstart.Rmd
doc/quickstart.html
man/HarmonyMatrix.Rd
man/RunHarmony.Rd
man/RunHarmony.Seurat.Rd
man/RunHarmony.SingleCellExperiment.Rd
man/RunHarmony.default.Rd
man/cell_lines.Rd
man/cell_lines_small.Rd
man/figures/logo.png
man/harmony.Rd
man/harmony_options.Rd
man/moe_ridge_get_betas.Rd
man/pbmc.ctrl.Rd
man/pbmc.stim.Rd
man/pipe.Rd
src/.gitignore
src/Makevars
src/Makevars.win
src/RcppExports.cpp
src/harmony.cpp
src/harmony.h
src/harmony_types.h
src/types.h
src/utils.cpp
src/utils.h
tests/testthat.R
tests/testthat/test_integration.R
vignettes/.gitignore
vignettes/Seurat.Rmd
vignettes/detailedWalkthrough.Rmd
vignettes/main.jpg
vignettes/quickstart.Rmd
