makeAggfileHelpers: Functions to make the area, age, length, predator, and prey...
In inspktrgadget/gadgetSim: Create Gadget replicates for use in simulation studies

Description Usage Arguments Value Examples

These are helper functions to the function make_aggfiles. make_<type>_agg_dir functions return a path to the printfile, make_<type>_aggfile produces the content for the aggfile itself, and the check_* family of functions checks for the presence of an aggfile in the printfile_comp of make_aggfiles and returns the aggfile and path if not present.

make_agg_dir(stocks, aggfile_dir, agg_type)

make_area_agg_dir(stocks, aggfile_dir)

make_age_agg_dir(stocks, aggfile_dir)

make_len_agg_dir(stocks, aggfile_dir)

make_predlen_agg_dir(stocks, aggfile_dir)

make_preylen_agg_dir(stocks, aggfile_dir)

make_area_aggfile(stocks)

make_age_aggfile(stocks)

make_len_aggfile(stocks, len_type = "length")

make_predlen_aggfile(stocks)

make_preylen_aggfile(stocks)

check_agg_type(printfile_comp, agg_type, stocks, aggfile_dir)

isNULL_aggfiles(printfile_comp)

`stocks`	A list of class `gadget_stock` or `gadget_stocks`
`aggfile_dir`	Character. Path of the directory where aggfiles will be printed
`printfile_comp`	A list of class pertaining to a Gadget printfile component, see `update_printfile`

make_*_agg_dir returns a character vector of a path to the printfile location. make_*_aggfile returns a character vector of the aggregate file itself ready to be written to file. The check_* functions look to see if the appropriate aggregate file is present, and, if not, will write the aggfile path to the aggfile line in printfile_comp of make_aggfiles and the aggfile as an attribute to printfile_comp.

main <- read_gadget_main(path = gad_mod_dir)
stocks <- read_gagdget_stockfiles(main = main, path = gad_mod_dir)
make_area_agg_dir(stocks, aggfile_dir = "print.aggfiles")
make_area_aggfile(stocks)