plotLOD-methods: It draws a chart with the percentage of under-LOD values in...

In isglobal-brge/rexposome: Exposome exploration and outcome data analysis

It draws a chart with the percentage of under-LOD values in an ExposomeSet

Description

This function can be used to draw the amount of under-LOD values in the exposures of an ExposomeSet.

Usage

plotLOD(object, lod.col = "LOD", x.max = 100, sort = TRUE)

Arguments

object	ExposomeSet which exposome will be plotted.
lod.col	(default "LOD") Name of the column in fData containing the LOD thresholds.
x.max	(default 100) Fix the maxium value of the X-axis.
sort	(default TRUE) If TRUE the chart will be ordered from the features with less missing data to the ones with more under-LOD values.

Value

A ggplot object.

See Also

plotFamily to draw the profile of a family of exposures, plotHistogram to draw the shape of an exposure, tableMissings to get a table with the missing data of an ExposomeSet, imputation to impute missing data on the exposures of an ExposomeSet

Examples

data("exposome")
# The included has no missing data
plotLOD(expo)

isglobal-brge/rexposome documentation built on Feb. 4, 2023, 12:35 p.m.